Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 PCGF3-213ENST00000620529 1899 ntBASIC16.9■□□□□ 0.3
CROCCP2Q86T23 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AL592071.1-201ENST00000611956 408 ntBASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AC124864.1-201ENST00000623408 392 ntBASIC16.9■□□□□ 0.3
CROCCP2Q86T23 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 AC016027.1-202ENST00000607927 1699 ntBASIC16.9■□□□□ 0.3
CROCCP2Q86T23 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP2Q86T23 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP2Q86T23 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.89■□□□□ 0.3
CROCCP2Q86T23 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP2Q86T23 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.89■□□□□ 0.3
CROCCP2Q86T23 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP2Q86T23 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AC090616.6-201ENST00000582640 721 ntBASIC16.89■□□□□ 0.29
CROCCP2Q86T23 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AC011558.1-201ENST00000623459 338 ntBASIC16.89■□□□□ 0.29
CROCCP2Q86T23 AL590326.2-201ENST00000625139 305 ntBASIC16.89■□□□□ 0.29
CROCCP2Q86T23 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP2Q86T23 REXO1L8P-201ENST00000604378 1897 ntBASIC16.88■□□□□ 0.29
CROCCP2Q86T23 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.88■□□□□ 0.29
CROCCP2Q86T23 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 ATP5G1P1-201ENST00000448724 379 ntBASIC16.88■□□□□ 0.29
CROCCP2Q86T23 HOMER2P1-201ENST00000455653 964 ntBASIC16.88■□□□□ 0.29
CROCCP2Q86T23 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP2Q86T23 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.88■□□□□ 0.29
CROCCP2Q86T23 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms