Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC149Q6ZUS6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 MTND6P24-201ENST00000440466 518 ntBASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 GPR53P-205ENST00000457298 1084 ntBASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AL132655.2-201ENST00000596276 594 ntBASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 RN7SL828P-201ENST00000607615 303 ntBASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 AL589739.1-201ENST00000607720 493 ntBASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC149Q6ZUS6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 ARSEP1-201ENST00000420443 635 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC087499.5-201ENST00000452760 1342 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC140912.1-201ENST00000577171 1054 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC092068.3-201ENST00000587894 2016 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 FZD10-202ENST00000539839 3282 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 AC018470.1-201ENST00000624790 3129 ntBASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC149Q6ZUS6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 SNX33P1-201ENST00000592116 1762 ntBASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 AC007541.1-201ENST00000570282 1469 ntBASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC149Q6ZUS6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 AC105021.1-202ENST00000570572 669 ntBASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC149Q6ZUS6 AC008738.7-201ENST00000609744 511 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms