Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DCLRE1AQ6PJP8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TERF1P3-201ENST00000505638 1227 ntBASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 GPAA1P2-202ENST00000606848 1787 ntBASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 AC006538.1-201ENST00000567905 1585 ntBASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DCLRE1AQ6PJP8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.64■□□□□ 0.42
DCLRE1AQ6PJP8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 AC092580.3-201ENST00000430932 139 ntBASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 AL512638.1-201ENST00000457493 794 ntBASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 HLA-J-202ENST00000469281 1241 ntBASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 AL390754.1-201ENST00000619088 582 ntBASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.64■□□□□ 0.41
DCLRE1AQ6PJP8 AL031731.1-201ENST00000642131 2094 ntBASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 AC236430.1-201ENST00000402231 743 ntBASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 AL353705.2-201ENST00000428243 662 ntBASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 AC093724.1-201ENST00000448659 1027 ntBASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.63■□□□□ 0.41
DCLRE1AQ6PJP8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms