Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC026748.1-201ENST00000624349 3251 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AL359258.3-201ENST00000622910 2331 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 RCN1P2-201ENST00000398357 915 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 RNPS1P1-201ENST00000507437 918 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 MTDHP3-201ENST00000594186 672 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 AC243591.1-201ENST00000452967 1364 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 MTHFR-217ENST00000641820 1569 ntBASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FOXR1Q6PIV2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 FER1L4-210ENST00000615531 5998 ntBASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 RPL13AP23-201ENST00000480739 586 ntBASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXR1Q6PIV2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms