Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AF228730.6-201ENST00000641497 218 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC084121.3-201ENST00000641716 218 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC105233.6-201ENST00000642093 218 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 AL645728.1-201ENST00000366221 2101 ntBASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC62Q6P9F0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 AL512652.2-201ENST00000625156 1716 ntBASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.58■□□□□ 0.57
CCDC62Q6P9F0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 HLA-V-204ENST00000476601 1289 ntBASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 AL391256.1-201ENST00000443260 1855 ntBASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC62Q6P9F0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 AL023806.1-201ENST00000603994 1649 ntBASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 BANF1P1-201ENST00000553684 263 ntBASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC62Q6P9F0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC62Q6P9F0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms