Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 AL031055.1-201ENST00000606362 631 ntBASIC19.82■□□□□ 0.76
RNF20Q5VTR2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 AC104109.2-201ENST00000602919 1418 ntBASIC19.82■□□□□ 0.76
RNF20Q5VTR2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 MTHFR-217ENST00000641820 1569 ntBASIC19.82■□□□□ 0.76
RNF20Q5VTR2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF20Q5VTR2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 FDX1P1-201ENST00000449115 551 ntBASIC19.8■□□□□ 0.76
RNF20Q5VTR2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 AC034105.1-201ENST00000563488 319 ntBASIC19.8■□□□□ 0.76
RNF20Q5VTR2 AC023141.13-201ENST00000604991 943 ntBASIC19.8■□□□□ 0.76
RNF20Q5VTR2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.8■□□□□ 0.76
RNF20Q5VTR2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF20Q5VTR2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.79■□□□□ 0.76
RNF20Q5VTR2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 AC011270.2-201ENST00000624293 2550 ntBASIC19.79■□□□□ 0.76
RNF20Q5VTR2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms