Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 GPAA1P2-202ENST00000606848 1787 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 Z97985.1-201ENST00000332270 946 ntBASIC17.5■□□□□ 0.39
VARS2Q5ST30 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 AC007274.1-201ENST00000439805 662 ntBASIC17.5■□□□□ 0.39
VARS2Q5ST30 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 RNA5SP410-201ENST00000516285 106 ntBASIC17.5■□□□□ 0.39
VARS2Q5ST30 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 RN7SL204P-201ENST00000582831 262 ntBASIC17.5■□□□□ 0.39
VARS2Q5ST30 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.5■□□□□ 0.39
VARS2Q5ST30 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VARS2Q5ST30 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC100757.3-201ENST00000622361 1406 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC005915.1-201ENST00000624912 2018 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC002472.2-201ENST00000442739 958 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC093724.1-201ENST00000448659 1027 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 GAPDHP21-201ENST00000450301 1010 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AL365223.1-201ENST00000574864 1297 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 AL138828.2-201ENST00000615812 383 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 GGT4P-201ENST00000623672 1708 ntBASIC17.49■□□□□ 0.39
VARS2Q5ST30 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VARS2Q5ST30 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARS2Q5ST30 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
VARS2Q5ST30 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARS2Q5ST30 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms