Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 KRT18P55-202ENST00000578578 1546 ntBASIC14.17□□□□□ -0.14
LRRK2Q5S007 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC012317.2-201ENST00000623305 2251 ntBASIC14.17□□□□□ -0.14
LRRK2Q5S007 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC124283.3-201ENST00000570869 594 ntBASIC14.17□□□□□ -0.14
LRRK2Q5S007 GNRHR2-203ENST00000581100 1187 ntBASIC14.17□□□□□ -0.14
LRRK2Q5S007 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 KRT8P49-201ENST00000604166 1432 ntBASIC14.17□□□□□ -0.14
LRRK2Q5S007 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRK2Q5S007 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRK2Q5S007 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AP006547.1-201ENST00000563435 692 ntBASIC14.16□□□□□ -0.14
LRRK2Q5S007 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.16□□□□□ -0.14
LRRK2Q5S007 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 MPDU1-223ENST00000582151 728 ntBASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC097724.1-201ENST00000609581 426 ntBASIC14.16□□□□□ -0.14
LRRK2Q5S007 AC005702.4-201ENST00000618393 416 ntBASIC14.16□□□□□ -0.14
LRRK2Q5S007 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRK2Q5S007 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRK2Q5S007 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 FTH1P14-201ENST00000482930 551 ntBASIC14.15□□□□□ -0.14
LRRK2Q5S007 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 MSTO2P-201ENST00000314835 1709 ntBASIC14.15□□□□□ -0.14
LRRK2Q5S007 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms