Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RNFT1Q5M7Z0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 AL603756.1-201ENST00000606511 2163 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 AL353705.2-201ENST00000428243 662 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 HLA-V-204ENST00000476601 1289 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 RN7SL828P-201ENST00000607615 303 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 AL031731.1-201ENST00000642131 2094 ntBASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNFT1Q5M7Z0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 AP001094.4-201ENST00000579008 2176 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 RPL37AP1-201ENST00000412502 279 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 MTND6P24-201ENST00000440466 518 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 AC093724.1-201ENST00000448659 1027 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 AP002490.2-201ENST00000524791 560 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 AC105021.1-202ENST00000570572 669 ntBASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNFT1Q5M7Z0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms