Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 TNRC18P3-201ENST00000441896 2691 ntBASIC20.22■□□□□ 0.83
CCDC93Q567U6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 MEP1AP4-201ENST00000423244 1087 ntBASIC20.22■□□□□ 0.83
CCDC93Q567U6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 MYCLP2-201ENST00000449268 967 ntBASIC20.22■□□□□ 0.83
CCDC93Q567U6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC93Q567U6 AC080080.1-201ENST00000625121 2420 ntBASIC20.22■□□□□ 0.83
CCDC93Q567U6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC93Q567U6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 AC245100.3-201ENST00000441281 285 ntBASIC20.21■□□□□ 0.83
CCDC93Q567U6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 TPRX2P-201ENST00000535362 881 ntBASIC20.21■□□□□ 0.83
CCDC93Q567U6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 AC099568.2-201ENST00000609194 695 ntBASIC20.21■□□□□ 0.83
CCDC93Q567U6 AL033527.4-201ENST00000641026 673 ntBASIC20.21■□□□□ 0.83
CCDC93Q567U6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC93Q567U6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC93Q567U6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 AC141586.5-201ENST00000624546 2050 ntBASIC20.2■□□□□ 0.82
CCDC93Q567U6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 MIR4259-201ENST00000584466 101 ntBASIC20.2■□□□□ 0.82
CCDC93Q567U6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC93Q567U6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC93Q567U6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms