Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 AC005622.1-201ENST00000636801 1703 ntBASIC19.72■□□□□ 0.75
PDS5AQ29RF7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PDS5AQ29RF7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 KRT8P12-202ENST00000472924 1397 ntBASIC19.71■□□□□ 0.75
PDS5AQ29RF7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 FZD10-202ENST00000539839 3282 ntBASIC19.71■□□□□ 0.75
PDS5AQ29RF7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 AC009407.1-201ENST00000568958 598 ntBASIC19.71■□□□□ 0.75
PDS5AQ29RF7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PDS5AQ29RF7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 AC245100.5-201ENST00000452108 331 ntBASIC19.7■□□□□ 0.74
PDS5AQ29RF7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.7■□□□□ 0.74
PDS5AQ29RF7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 SERBP1P5-201ENST00000510079 1181 ntBASIC19.69■□□□□ 0.74
PDS5AQ29RF7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PDS5AQ29RF7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms