Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
NKX6-1P78426 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX6-1P78426 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX6-1P78426 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-1P78426 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX6-1P78426 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX6-1P78426 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX6-1P78426 AC069262.1-201ENST00000539058 672 ntBASIC14.67□□□□□ -0.06
NKX6-1P78426 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX6-1P78426 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX6-1P78426 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-1P78426 AC005498.2-205ENST00000593218 784 ntBASIC14.67□□□□□ -0.06
NKX6-1P78426 AC068137.2-201ENST00000605408 478 ntBASIC14.67□□□□□ -0.06
NKX6-1P78426 REXO1L3P-201ENST00000622202 1288 ntBASIC14.67□□□□□ -0.06
NKX6-1P78426 LINC00628-201ENST00000628516 1289 ntBASIC14.67□□□□□ -0.06
NKX6-1P78426 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-1P78426 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NKX6-1P78426 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NKX6-1P78426 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-1P78426 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-1P78426 AC129492.6-201ENST00000611383 1305 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NKX6-1P78426 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 FAM185BP-201ENST00000443595 716 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC023141.5-201ENST00000458585 616 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 CXCL1P1-201ENST00000502804 216 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC109322.1-201ENST00000524499 1264 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX6-1P78426 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 AC007326.2-201ENST00000624224 7579 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-1P78426 NKILA-202ENST00000614771 2598 ntBASIC14.66□□□□□ -0.06
NKX6-1P78426 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-1P78426 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NKX6-1P78426 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-1P78426 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms