Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS1BP61024 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS1BP61024 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS1BP61024 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CKS1BP61024 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CKS1BP61024 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CKS1BP61024 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 AC006058.4-201ENST00000624016 1670 ntBASIC11.71□□□□□ -0.54
CKS1BP61024 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CKS1BP61024 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.71□□□□□ -0.54
CKS1BP61024 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.71□□□□□ -0.54
CKS1BP61024 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CKS1BP61024 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.71□□□□□ -0.54
CKS1BP61024 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS1BP61024 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 LINC01311-201ENST00000565162 1445 ntBASIC11.7□□□□□ -0.54
CKS1BP61024 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.7□□□□□ -0.54
CKS1BP61024 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 KRT8P47-201ENST00000604727 1398 ntBASIC11.7□□□□□ -0.54
CKS1BP61024 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CKS1BP61024 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS1BP61024 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
CKS1BP61024 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS1BP61024 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS1BP61024 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS1BP61024 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS1BP61024 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms