Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
WNT3AP56704 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.75■□□□□ 0.27
WNT3AP56704 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
WNT3AP56704 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
WNT3AP56704 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.75■□□□□ 0.27
WNT3AP56704 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3AP56704 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3AP56704 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3AP56704 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 MIR574-201ENST00000385209 96 ntBASIC16.74■□□□□ 0.27
WNT3AP56704 AC092474.2-201ENST00000424288 719 ntBASIC16.74■□□□□ 0.27
WNT3AP56704 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.74■□□□□ 0.27
WNT3AP56704 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3AP56704 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
WNT3AP56704 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.74■□□□□ 0.27
WNT3AP56704 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3AP56704 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.74■□□□□ 0.27
WNT3AP56704 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.74■□□□□ 0.27
WNT3AP56704 AC068137.2-201ENST00000605408 478 ntBASIC16.74■□□□□ 0.27
WNT3AP56704 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 CYP2T1P-202ENST00000641596 2535 ntBASIC16.74■□□□□ 0.27
WNT3AP56704 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3AP56704 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
WNT3AP56704 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3AP56704 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
WNT3AP56704 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3AP56704 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3AP56704 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
WNT3AP56704 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3AP56704 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3AP56704 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3AP56704 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3AP56704 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3AP56704 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3AP56704 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
WNT3AP56704 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3AP56704 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
WNT3AP56704 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3AP56704 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
WNT3AP56704 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms