Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 AC093724.1-201ENST00000448659 1027 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.99□□□□□ -0.01
SUMO3P55854 PRYP6-201ENST00000514804 343 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 AL135744.1-201ENST00000565098 629 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 AC005829.1-201ENST00000570002 483 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 MIR3687-2-201ENST00000577708 61 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 MIR3687-1-201ENST00000614492 61 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 AC084018.2-201ENST00000613093 2607 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 U82695.1-201ENST00000635752 1889 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.98□□□□□ -0.01
SUMO3P55854 TFAMP1-201ENST00000412727 736 ntBASIC14.98□□□□□ -0.01
SUMO3P55854 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.98□□□□□ -0.01
SUMO3P55854 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.98□□□□□ -0.01
SUMO3P55854 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
SUMO3P55854 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.98□□□□□ -0.01
SUMO3P55854 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.98□□□□□ -0.01
SUMO3P55854 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
SUMO3P55854 AC026120.1-201ENST00000611536 926 ntBASIC14.98□□□□□ -0.01
SUMO3P55854 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.98□□□□□ -0.01
SUMO3P55854 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SUMO3P55854 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.98□□□□□ -0.01
SUMO3P55854 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SUMO3P55854 ELL2P1-201ENST00000413990 1906 ntBASIC14.98□□□□□ -0.01
SUMO3P55854 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SUMO3P55854 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.98□□□□□ -0.01
SUMO3P55854 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.97□□□□□ -0.01
SUMO3P55854 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.97□□□□□ -0.01
SUMO3P55854 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.97□□□□□ -0.01
SUMO3P55854 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 ALG1L5P-201ENST00000482043 771 ntBASIC14.97□□□□□ -0.01
SUMO3P55854 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 YBX1P5-201ENST00000509441 847 ntBASIC14.97□□□□□ -0.01
SUMO3P55854 AC105233.2-201ENST00000523697 349 ntBASIC14.97□□□□□ -0.01
SUMO3P55854 AF228730.5-201ENST00000530288 346 ntBASIC14.97□□□□□ -0.01
SUMO3P55854 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
SUMO3P55854 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC073389.1-201ENST00000595595 795 ntBASIC14.97□□□□□ -0.01
SUMO3P55854 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.97□□□□□ -0.01
SUMO3P55854 AC073439.1-201ENST00000624121 1774 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms