Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC093724.1-201ENST00000448659 1027 ntBASIC17.24■□□□□ 0.35
EPHB3P54753 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.24■□□□□ 0.35
EPHB3P54753 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
EPHB3P54753 AC105021.1-202ENST00000570572 669 ntBASIC17.24■□□□□ 0.35
EPHB3P54753 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHB3P54753 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHB3P54753 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHB3P54753 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EPHB3P54753 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
EPHB3P54753 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
EPHB3P54753 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHB3P54753 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
EPHB3P54753 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EPHB3P54753 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EPHB3P54753 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
EPHB3P54753 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EPHB3P54753 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.23■□□□□ 0.35
EPHB3P54753 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.23■□□□□ 0.35
EPHB3P54753 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.23■□□□□ 0.35
EPHB3P54753 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.23■□□□□ 0.35
EPHB3P54753 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.23■□□□□ 0.35
EPHB3P54753 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.23■□□□□ 0.35
EPHB3P54753 AC009118.2-201ENST00000613275 655 ntBASIC17.23■□□□□ 0.35
EPHB3P54753 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 AF228730.6-201ENST00000641497 218 ntBASIC17.23■□□□□ 0.35
EPHB3P54753 AC084121.3-201ENST00000641716 218 ntBASIC17.23■□□□□ 0.35
EPHB3P54753 AC105233.6-201ENST00000642093 218 ntBASIC17.23■□□□□ 0.35
EPHB3P54753 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHB3P54753 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHB3P54753 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EPHB3P54753 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 AL031731.1-201ENST00000642131 2094 ntBASIC17.22■□□□□ 0.35
EPHB3P54753 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EPHB3P54753 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.22■□□□□ 0.35
EPHB3P54753 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 MRPS18AP1-201ENST00000414458 589 ntBASIC17.22■□□□□ 0.35
EPHB3P54753 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHB3P54753 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.22■□□□□ 0.35
EPHB3P54753 AC239800.4-201ENST00000603712 296 ntBASIC17.22■□□□□ 0.35
EPHB3P54753 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHB3P54753 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHB3P54753 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHB3P54753 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHB3P54753 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
EPHB3P54753 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHB3P54753 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHB3P54753 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EPHB3P54753 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHB3P54753 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHB3P54753 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHB3P54753 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EPHB3P54753 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHB3P54753 AC006538.1-201ENST00000567905 1585 ntBASIC17.21■□□□□ 0.35
EPHB3P54753 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHB3P54753 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHB3P54753 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms