Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.69■□□□□ 0.58
USP11P51784 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 AC142381.1-201ENST00000426099 345 ntBASIC18.69■□□□□ 0.58
USP11P51784 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.69■□□□□ 0.58
USP11P51784 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.69■□□□□ 0.58
USP11P51784 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.69■□□□□ 0.58
USP11P51784 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.69■□□□□ 0.58
USP11P51784 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.69■□□□□ 0.58
USP11P51784 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.69■□□□□ 0.58
USP11P51784 AL118508.1-201ENST00000613502 2345 ntBASIC18.69■□□□□ 0.58
USP11P51784 TNRC18P3-201ENST00000441896 2691 ntBASIC18.69■□□□□ 0.58
USP11P51784 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.69■□□□□ 0.58
USP11P51784 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.69■□□□□ 0.58
USP11P51784 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP11P51784 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.69■□□□□ 0.58
USP11P51784 FOXO1B-201ENST00000504678 1527 ntBASIC18.69■□□□□ 0.58
USP11P51784 UXT-AS1-201ENST00000590504 1525 ntBASIC18.69■□□□□ 0.58
USP11P51784 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP11P51784 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.68■□□□□ 0.58
USP11P51784 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.68■□□□□ 0.58
USP11P51784 FAM58DP-201ENST00000428076 619 ntBASIC18.68■□□□□ 0.58
USP11P51784 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.68■□□□□ 0.58
USP11P51784 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.68■□□□□ 0.58
USP11P51784 AC023141.5-201ENST00000458585 616 ntBASIC18.68■□□□□ 0.58
USP11P51784 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.68■□□□□ 0.58
USP11P51784 AC098859.1-201ENST00000502915 1238 ntBASIC18.68■□□□□ 0.58
USP11P51784 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 AC027612.4-201ENST00000605371 583 ntBASIC18.68■□□□□ 0.58
USP11P51784 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 AC009093.7-201ENST00000623853 1223 ntBASIC18.68■□□□□ 0.58
USP11P51784 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.68■□□□□ 0.58
USP11P51784 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 ALOX12P2-203ENST00000570921 1945 ntBASIC18.68■□□□□ 0.58
USP11P51784 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 AC005622.1-201ENST00000636801 1703 ntBASIC18.68■□□□□ 0.58
USP11P51784 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USP11P51784 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USP11P51784 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.68■□□□□ 0.58
USP11P51784 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP11P51784 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.67■□□□□ 0.58
USP11P51784 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP11P51784 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.67■□□□□ 0.58
USP11P51784 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.67■□□□□ 0.58
USP11P51784 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.67■□□□□ 0.58
USP11P51784 SPTSSB-204ENST00000617024 1292 ntBASIC18.67■□□□□ 0.58
USP11P51784 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms