Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.28■□□□□ 0.52
GPC3P51654 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 SPCS2P1-201ENST00000561636 679 ntBASIC18.28■□□□□ 0.52
GPC3P51654 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 AC011467.4-201ENST00000594891 528 ntBASIC18.28■□□□□ 0.52
GPC3P51654 AC073389.1-201ENST00000595595 795 ntBASIC18.28■□□□□ 0.52
GPC3P51654 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC3P51654 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 KRT8P39-201ENST00000396270 1433 ntBASIC18.28■□□□□ 0.52
GPC3P51654 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPC3P51654 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 AC008677.1-201ENST00000519230 1561 ntBASIC18.28■□□□□ 0.52
GPC3P51654 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GPC3P51654 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GPC3P51654 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GPC3P51654 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC3P51654 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.28■□□□□ 0.52
GPC3P51654 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.28■□□□□ 0.52
GPC3P51654 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GPC3P51654 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC3P51654 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC3P51654 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
GPC3P51654 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GPC3P51654 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
GPC3P51654 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC3P51654 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC3P51654 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC3P51654 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GPC3P51654 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC3P51654 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC3P51654 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC3P51654 AC105233.2-201ENST00000523697 349 ntBASIC18.27■□□□□ 0.52
GPC3P51654 AF228730.5-201ENST00000530288 346 ntBASIC18.27■□□□□ 0.52
GPC3P51654 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC3P51654 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
GPC3P51654 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GPC3P51654 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC3P51654 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC3P51654 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC3P51654 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPC3P51654 AL391256.1-201ENST00000443260 1855 ntBASIC18.26■□□□□ 0.51
GPC3P51654 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.26■□□□□ 0.51
GPC3P51654 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC3P51654 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
GPC3P51654 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 OR6D1P-203ENST00000641209 4860 ntBASIC18.26■□□□□ 0.51
GPC3P51654 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC3P51654 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC3P51654 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 SPDYE7P-202ENST00000420373 878 ntBASIC18.26■□□□□ 0.51
GPC3P51654 KLF2P3-201ENST00000451977 1087 ntBASIC18.26■□□□□ 0.51
GPC3P51654 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC3P51654 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.26■□□□□ 0.51
GPC3P51654 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC3P51654 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 LINC02084-201ENST00000606069 1096 ntBASIC18.26■□□□□ 0.51
GPC3P51654 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC3P51654 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC3P51654 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC3P51654 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GPC3P51654 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms