Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HCFC1P51610 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.35□□□□□ -0.11
HCFC1P51610 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.35□□□□□ -0.11
HCFC1P51610 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.35□□□□□ -0.11
HCFC1P51610 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 AC119751.2-201ENST00000504529 210 ntBASIC14.35□□□□□ -0.11
HCFC1P51610 SPDYE18-201ENST00000510091 1050 ntBASIC14.35□□□□□ -0.11
HCFC1P51610 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 AC105021.1-202ENST00000570572 669 ntBASIC14.35□□□□□ -0.11
HCFC1P51610 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.35□□□□□ -0.11
HCFC1P51610 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HCFC1P51610 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCFC1P51610 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HCFC1P51610 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.35□□□□□ -0.11
HCFC1P51610 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HCFC1P51610 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 DFFBP1-201ENST00000433250 979 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 RPS2P32-201ENST00000439199 892 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 SNX29P1-201ENST00000548357 1007 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 AC061975.2-201ENST00000581722 295 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 TUBB8P12-201ENST00000308911 1335 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 TUBB7P-202ENST00000428444 1305 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 TUBB8P7-204ENST00000567960 1332 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HCFC1P51610 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HCFC1P51610 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 ARSEP1-201ENST00000420443 635 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.34□□□□□ -0.11
HCFC1P51610 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 AC024267.1-201ENST00000582320 895 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 AC008494.3-201ENST00000606615 944 ntBASIC14.34□□□□□ -0.11
HCFC1P51610 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.34□□□□□ -0.11
HCFC1P51610 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HCFC1P51610 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.34□□□□□ -0.11
HCFC1P51610 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms