Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CENPFP49454 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.42■□□□□ 0.54
CENPFP49454 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.42■□□□□ 0.54
CENPFP49454 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CENPFP49454 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
CENPFP49454 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.42■□□□□ 0.54
CENPFP49454 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CENPFP49454 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.42■□□□□ 0.54
CENPFP49454 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CENPFP49454 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CENPFP49454 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CENPFP49454 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.42■□□□□ 0.54
CENPFP49454 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.42■□□□□ 0.54
CENPFP49454 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.42■□□□□ 0.54
CENPFP49454 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.42■□□□□ 0.54
CENPFP49454 AC015967.2-201ENST00000624092 234 ntBASIC18.42■□□□□ 0.54
CENPFP49454 AC006435.4-201ENST00000625037 234 ntBASIC18.42■□□□□ 0.54
CENPFP49454 AL356737.1-201ENST00000634391 234 ntBASIC18.42■□□□□ 0.54
CENPFP49454 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.41■□□□□ 0.54
CENPFP49454 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.41■□□□□ 0.54
CENPFP49454 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CENPFP49454 AC098859.1-201ENST00000502915 1238 ntBASIC18.41■□□□□ 0.54
CENPFP49454 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.41■□□□□ 0.54
CENPFP49454 MPDU1-223ENST00000582151 728 ntBASIC18.41■□□□□ 0.54
CENPFP49454 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CENPFP49454 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.41■□□□□ 0.54
CENPFP49454 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CENPFP49454 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CENPFP49454 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.41■□□□□ 0.54
CENPFP49454 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.41■□□□□ 0.54
CENPFP49454 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CENPFP49454 AL589702.1-201ENST00000641229 1509 ntBASIC18.41■□□□□ 0.54
CENPFP49454 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.41■□□□□ 0.54
CENPFP49454 AC253536.4-201ENST00000440539 267 ntBASIC18.41■□□□□ 0.54
CENPFP49454 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.41■□□□□ 0.54
CENPFP49454 FAM86HP-204ENST00000513466 959 ntBASIC18.41■□□□□ 0.54
CENPFP49454 AC020765.3-201ENST00000613051 740 ntBASIC18.41■□□□□ 0.54
CENPFP49454 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.41■□□□□ 0.54
CENPFP49454 AL645728.1-201ENST00000366221 2101 ntBASIC18.41■□□□□ 0.54
CENPFP49454 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
CENPFP49454 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.4■□□□□ 0.54
CENPFP49454 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 AL162726.2-201ENST00000438986 1017 ntBASIC18.4■□□□□ 0.54
CENPFP49454 AC106872.11-201ENST00000605838 421 ntBASIC18.4■□□□□ 0.54
CENPFP49454 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.4■□□□□ 0.54
CENPFP49454 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CENPFP49454 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 AC133963.1-201ENST00000504166 1679 ntBASIC18.4■□□□□ 0.54
CENPFP49454 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 SLC25A1P3-201ENST00000395415 828 ntBASIC18.4■□□□□ 0.54
CENPFP49454 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.4■□□□□ 0.54
CENPFP49454 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 GNRHR2-203ENST00000581100 1187 ntBASIC18.4■□□□□ 0.54
CENPFP49454 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.4■□□□□ 0.54
CENPFP49454 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.4■□□□□ 0.54
CENPFP49454 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 AC134043.2-201ENST00000624206 2238 ntBASIC18.4■□□□□ 0.54
CENPFP49454 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 CLK3P2-201ENST00000427566 1453 ntBASIC18.4■□□□□ 0.54
CENPFP49454 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.4■□□□□ 0.54
CENPFP49454 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.4■□□□□ 0.54
CENPFP49454 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CENPFP49454 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CENPFP49454 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CENPFP49454 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 AP001258.2-201ENST00000529891 490 ntBASIC18.39■□□□□ 0.53
CENPFP49454 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.39■□□□□ 0.53
CENPFP49454 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms