Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.67□□□□□ -0.06
SOX2P48431 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SOX2P48431 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 LINC00265-3P-201ENST00000447588 903 ntBASIC14.67□□□□□ -0.06
SOX2P48431 TSSC2-201ENST00000450217 709 ntBASIC14.67□□□□□ -0.06
SOX2P48431 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.67□□□□□ -0.06
SOX2P48431 AC013467.2-201ENST00000605472 835 ntBASIC14.67□□□□□ -0.06
SOX2P48431 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 GGT3P-204ENST00000453783 1664 ntBASIC14.67□□□□□ -0.06
SOX2P48431 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.67□□□□□ -0.06
SOX2P48431 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.67□□□□□ -0.06
SOX2P48431 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SOX2P48431 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SOX2P48431 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 AC103702.1-201ENST00000548801 2630 ntBASIC14.66□□□□□ -0.06
SOX2P48431 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SOX2P48431 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SOX2P48431 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.66□□□□□ -0.06
SOX2P48431 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 TPSP2-201ENST00000561760 610 ntBASIC14.66□□□□□ -0.06
SOX2P48431 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.66□□□□□ -0.06
SOX2P48431 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.66□□□□□ -0.06
SOX2P48431 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.66□□□□□ -0.06
SOX2P48431 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 AC114341.1-201ENST00000618070 349 ntBASIC14.66□□□□□ -0.06
SOX2P48431 AL121956.5-201ENST00000625261 221 ntBASIC14.66□□□□□ -0.06
SOX2P48431 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.66□□□□□ -0.06
SOX2P48431 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms