Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
NEDD4P46934 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.47■□□□□ 0.71
NEDD4P46934 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.47■□□□□ 0.71
NEDD4P46934 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.47■□□□□ 0.71
NEDD4P46934 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.47■□□□□ 0.71
NEDD4P46934 AP000842.3-202ENST00000569238 1080 ntBASIC19.47■□□□□ 0.71
NEDD4P46934 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 AC073389.1-201ENST00000595595 795 ntBASIC19.47■□□□□ 0.71
NEDD4P46934 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.47■□□□□ 0.71
NEDD4P46934 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
NEDD4P46934 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NEDD4P46934 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NEDD4P46934 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.46■□□□□ 0.71
NEDD4P46934 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 PCDH8P1-201ENST00000428983 2773 ntBASIC19.46■□□□□ 0.71
NEDD4P46934 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.46■□□□□ 0.71
NEDD4P46934 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.46■□□□□ 0.71
NEDD4P46934 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.46■□□□□ 0.71
NEDD4P46934 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NEDD4P46934 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.46■□□□□ 0.71
NEDD4P46934 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.46■□□□□ 0.71
NEDD4P46934 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.46■□□□□ 0.71
NEDD4P46934 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.46■□□□□ 0.71
NEDD4P46934 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.46■□□□□ 0.71
NEDD4P46934 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NEDD4P46934 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEDD4P46934 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.45■□□□□ 0.7
NEDD4P46934 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
NEDD4P46934 SNHG9-202ENST00000564014 471 ntBASIC19.45■□□□□ 0.7
NEDD4P46934 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
NEDD4P46934 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 AC004835.2-201ENST00000603762 682 ntBASIC19.45■□□□□ 0.7
NEDD4P46934 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEDD4P46934 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.45■□□□□ 0.7
NEDD4P46934 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.45■□□□□ 0.7
NEDD4P46934 LINC01144-201ENST00000626198 1710 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms