Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.73■□□□□ 0.43
SSR1P43307 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR1P43307 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.73■□□□□ 0.43
SSR1P43307 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR1P43307 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 PTCHD3P3-201ENST00000403073 906 ntBASIC17.72■□□□□ 0.43
SSR1P43307 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 AC021087.4-201ENST00000563761 564 ntBASIC17.72■□□□□ 0.43
SSR1P43307 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 AC004706.3-202ENST00000621574 984 ntBASIC17.72■□□□□ 0.43
SSR1P43307 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SSR1P43307 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.72■□□□□ 0.43
SSR1P43307 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR1P43307 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.72■□□□□ 0.43
SSR1P43307 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 DOC2GP-204ENST00000639052 2548 ntBASIC17.71■□□□□ 0.43
SSR1P43307 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SSR1P43307 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SSR1P43307 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SSR1P43307 ALOX12P2-203ENST00000570921 1945 ntBASIC17.71■□□□□ 0.43
SSR1P43307 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SSR1P43307 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR1P43307 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR1P43307 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR1P43307 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR1P43307 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.71■□□□□ 0.43
SSR1P43307 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSR1P43307 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.71■□□□□ 0.43
SSR1P43307 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSR1P43307 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSR1P43307 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.71■□□□□ 0.42
SSR1P43307 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSR1P43307 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSR1P43307 AC006504.4-201ENST00000592118 1568 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms