Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
KRT2P35908 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KRT2P35908 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KRT2P35908 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KRT2P35908 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 CYP2T1P-202ENST00000641596 2535 ntBASIC18.99■□□□□ 0.63
KRT2P35908 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 AP000347.1-202ENST00000435868 847 ntBASIC18.99■□□□□ 0.63
KRT2P35908 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT2P35908 AC040169.1-201ENST00000565382 521 ntBASIC18.99■□□□□ 0.63
KRT2P35908 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT2P35908 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 AL671883.3-201ENST00000603274 991 ntBASIC18.99■□□□□ 0.63
KRT2P35908 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
KRT2P35908 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT2P35908 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KRT2P35908 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT2P35908 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT2P35908 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT2P35908 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 PGAM5P1-201ENST00000518923 814 ntBASIC18.98■□□□□ 0.63
KRT2P35908 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.98■□□□□ 0.63
KRT2P35908 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT2P35908 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 AL078644.1-201ENST00000609881 752 ntBASIC18.98■□□□□ 0.63
KRT2P35908 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT2P35908 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT2P35908 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT2P35908 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 AC016027.1-202ENST00000607927 1699 ntBASIC18.98■□□□□ 0.63
KRT2P35908 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT2P35908 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KRT2P35908 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT2P35908 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT2P35908 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT2P35908 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms