Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 AC005052.1-201ENST00000625181 2492 ntBASIC17.53■□□□□ 0.4
CHRNA3P32297 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.53■□□□□ 0.4
CHRNA3P32297 AC009947.1-201ENST00000444350 727 ntBASIC17.53■□□□□ 0.4
CHRNA3P32297 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA3P32297 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 TERC-201ENST00000602385 541 ntBASIC17.53■□□□□ 0.4
CHRNA3P32297 AL353135.1-201ENST00000606729 504 ntBASIC17.53■□□□□ 0.4
CHRNA3P32297 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA3P32297 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA3P32297 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
CHRNA3P32297 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA3P32297 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 AC132872.4-202ENST00000622924 2756 ntBASIC17.52■□□□□ 0.4
CHRNA3P32297 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CHRNA3P32297 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.52■□□□□ 0.4
CHRNA3P32297 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.52■□□□□ 0.4
CHRNA3P32297 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA3P32297 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA3P32297 AC027601.4-201ENST00000611259 610 ntBASIC17.52■□□□□ 0.4
CHRNA3P32297 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA3P32297 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA3P32297 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CHRNA3P32297 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CHRNA3P32297 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.52■□□□□ 0.39
CHRNA3P32297 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CHRNA3P32297 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA3P32297 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA3P32297 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHRNA3P32297 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA3P32297 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA3P32297 AC108751.1-201ENST00000490852 363 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms