Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GJA1P17302 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.14■□□□□ 0.33
GJA1P17302 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.14■□□□□ 0.33
GJA1P17302 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.14■□□□□ 0.33
GJA1P17302 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.14■□□□□ 0.33
GJA1P17302 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.14■□□□□ 0.33
GJA1P17302 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.14■□□□□ 0.33
GJA1P17302 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 AL844908.2-201ENST00000609461 460 ntBASIC17.14■□□□□ 0.33
GJA1P17302 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GJA1P17302 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GJA1P17302 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
GJA1P17302 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
GJA1P17302 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GJA1P17302 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 PIN1P1-201ENST00000412108 996 ntBASIC17.13■□□□□ 0.33
GJA1P17302 SPTLC1P1-201ENST00000447199 261 ntBASIC17.13■□□□□ 0.33
GJA1P17302 AC009477.1-201ENST00000452936 217 ntBASIC17.13■□□□□ 0.33
GJA1P17302 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 AL133215.2-201ENST00000609242 977 ntBASIC17.13■□□□□ 0.33
GJA1P17302 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
GJA1P17302 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GJA1P17302 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GJA1P17302 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GJA1P17302 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.12■□□□□ 0.33
GJA1P17302 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.12■□□□□ 0.33
GJA1P17302 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.12■□□□□ 0.33
GJA1P17302 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.12■□□□□ 0.33
GJA1P17302 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GJA1P17302 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 GAPDHP21-201ENST00000450301 1010 ntBASIC17.12■□□□□ 0.33
GJA1P17302 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.12■□□□□ 0.33
GJA1P17302 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.12■□□□□ 0.33
GJA1P17302 SPDYE22P-201ENST00000582158 798 ntBASIC17.12■□□□□ 0.33
GJA1P17302 AC025048.6-201ENST00000634326 1161 ntBASIC17.12■□□□□ 0.33
GJA1P17302 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GJA1P17302 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GJA1P17302 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms