Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BRAFP15056 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRAFP15056 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BRAFP15056 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.13■□□□□ 0.33
BRAFP15056 AP001005.1-201ENST00000571755 1248 ntBASIC17.13■□□□□ 0.33
BRAFP15056 STK25P1-201ENST00000585406 838 ntBASIC17.13■□□□□ 0.33
BRAFP15056 AL049840.3-201ENST00000602669 611 ntBASIC17.13■□□□□ 0.33
BRAFP15056 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.13■□□□□ 0.33
BRAFP15056 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 AC005052.1-201ENST00000625181 2492 ntBASIC17.13■□□□□ 0.33
BRAFP15056 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 AC148477.5-201ENST00000625164 1645 ntBASIC17.13■□□□□ 0.33
BRAFP15056 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
BRAFP15056 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.13■□□□□ 0.33
BRAFP15056 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.13■□□□□ 0.33
BRAFP15056 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 NFIC-211ENST00000641145 8399 ntBASIC17.13■□□□□ 0.33
BRAFP15056 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRAFP15056 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.12■□□□□ 0.33
BRAFP15056 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.12■□□□□ 0.33
BRAFP15056 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 RPS2P1-201ENST00000434010 821 ntBASIC17.12■□□□□ 0.33
BRAFP15056 AC079776.4-201ENST00000511039 504 ntBASIC17.12■□□□□ 0.33
BRAFP15056 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.12■□□□□ 0.33
BRAFP15056 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 MTDHP4-201ENST00000600287 670 ntBASIC17.12■□□□□ 0.33
BRAFP15056 MIR7706-201ENST00000613747 67 ntBASIC17.12■□□□□ 0.33
BRAFP15056 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 FAM215A-202ENST00000632077 792 ntBASIC17.12■□□□□ 0.33
BRAFP15056 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BRAFP15056 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.12■□□□□ 0.33
BRAFP15056 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BRAFP15056 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRAFP15056 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BRAFP15056 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms