Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS1P07996 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS1P07996 SLC25A1P1-201ENST00000528351 927 ntBASIC15.28■□□□□ 0.04
THBS1P07996 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS1P07996 MIR4751-201ENST00000578027 74 ntBASIC15.28■□□□□ 0.04
THBS1P07996 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.28■□□□□ 0.04
THBS1P07996 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS1P07996 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.28■□□□□ 0.04
THBS1P07996 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
THBS1P07996 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
THBS1P07996 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 PCDHA1-201ENST00000378133 2726 ntBASIC15.27■□□□□ 0.04
THBS1P07996 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.27■□□□□ 0.04
THBS1P07996 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS1P07996 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
THBS1P07996 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 RNU1-129P-201ENST00000384064 167 ntBASIC15.27■□□□□ 0.04
THBS1P07996 AC098831.1-202ENST00000438821 336 ntBASIC15.27■□□□□ 0.04
THBS1P07996 AC093909.1-201ENST00000504731 1122 ntBASIC15.27■□□□□ 0.04
THBS1P07996 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 AC106730.1-201ENST00000566722 1090 ntBASIC15.27■□□□□ 0.04
THBS1P07996 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 U1.21-201ENST00000580816 167 ntBASIC15.27■□□□□ 0.04
THBS1P07996 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS1P07996 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.27■□□□□ 0.04
THBS1P07996 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
THBS1P07996 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
THBS1P07996 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.27■□□□□ 0.03
THBS1P07996 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.27■□□□□ 0.03
THBS1P07996 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.27■□□□□ 0.03
THBS1P07996 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.27■□□□□ 0.03
THBS1P07996 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
THBS1P07996 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
THBS1P07996 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.27■□□□□ 0.03
THBS1P07996 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS1P07996 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms