Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.7■□□□□ 0.26
RETP07949 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RETP07949 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RETP07949 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 AC007541.1-201ENST00000570282 1469 ntBASIC16.7■□□□□ 0.26
RETP07949 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.7■□□□□ 0.26
RETP07949 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.7■□□□□ 0.26
RETP07949 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 AC018529.1-201ENST00000613063 361 ntBASIC16.7■□□□□ 0.26
RETP07949 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 SPDYE12P-201ENST00000618416 771 ntBASIC16.7■□□□□ 0.26
RETP07949 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RETP07949 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.7■□□□□ 0.26
RETP07949 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RETP07949 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.7■□□□□ 0.26
RETP07949 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.7■□□□□ 0.26
RETP07949 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RETP07949 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
RETP07949 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RETP07949 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RETP07949 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.69■□□□□ 0.26
RETP07949 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.69■□□□□ 0.26
RETP07949 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.69■□□□□ 0.26
RETP07949 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RETP07949 HLA-V-204ENST00000476601 1289 ntBASIC16.69■□□□□ 0.26
RETP07949 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.69■□□□□ 0.26
RETP07949 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.69■□□□□ 0.26
RETP07949 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.69■□□□□ 0.26
RETP07949 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.69■□□□□ 0.26
RETP07949 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RETP07949 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.69■□□□□ 0.26
RETP07949 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.69■□□□□ 0.26
RETP07949 AL132655.2-201ENST00000596276 594 ntBASIC16.69■□□□□ 0.26
RETP07949 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.69■□□□□ 0.26
RETP07949 MIR6805-201ENST00000615055 62 ntBASIC16.69■□□□□ 0.26
RETP07949 AL138828.2-201ENST00000615812 383 ntBASIC16.69■□□□□ 0.26
RETP07949 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.69■□□□□ 0.26
RETP07949 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.69■□□□□ 0.26
RETP07949 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.69■□□□□ 0.26
RETP07949 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
RETP07949 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RETP07949 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RETP07949 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.68■□□□□ 0.26
RETP07949 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.68■□□□□ 0.26
RETP07949 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RETP07949 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.68■□□□□ 0.26
RETP07949 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.68■□□□□ 0.26
RETP07949 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.68■□□□□ 0.26
RETP07949 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.68■□□□□ 0.26
RETP07949 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.68■□□□□ 0.26
RETP07949 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.68■□□□□ 0.26
RETP07949 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.68■□□□□ 0.26
RETP07949 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RETP07949 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.68■□□□□ 0.26
RETP07949 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.68■□□□□ 0.26
RETP07949 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.68■□□□□ 0.26
RETP07949 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RETP07949 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms