Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.68■□□□□ 0.58
TPM3P06753 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TPM3P06753 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPM3P06753 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.67■□□□□ 0.58
TPM3P06753 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 AC073508.3-201ENST00000619697 1419 ntBASIC18.67■□□□□ 0.58
TPM3P06753 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.67■□□□□ 0.58
TPM3P06753 GGT4P-201ENST00000623672 1708 ntBASIC18.67■□□□□ 0.58
TPM3P06753 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.67■□□□□ 0.58
TPM3P06753 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.67■□□□□ 0.58
TPM3P06753 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.67■□□□□ 0.58
TPM3P06753 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.67■□□□□ 0.58
TPM3P06753 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 AC011467.2-201ENST00000598425 242 ntBASIC18.67■□□□□ 0.58
TPM3P06753 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.67■□□□□ 0.58
TPM3P06753 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.67■□□□□ 0.58
TPM3P06753 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TPM3P06753 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPM3P06753 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TPM3P06753 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TPM3P06753 AC006449.6-201ENST00000612330 2296 ntBASIC18.66■□□□□ 0.58
TPM3P06753 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.66■□□□□ 0.58
TPM3P06753 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 AL596275.1-201ENST00000423464 877 ntBASIC18.66■□□□□ 0.58
TPM3P06753 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 AL845331.1-201ENST00000424978 1190 ntBASIC18.66■□□□□ 0.58
TPM3P06753 SIGLEC30P-201ENST00000455569 941 ntBASIC18.66■□□□□ 0.58
TPM3P06753 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.66■□□□□ 0.58
TPM3P06753 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 AC083849.1-201ENST00000615227 514 ntBASIC18.66■□□□□ 0.58
TPM3P06753 AL139011.1-202ENST00000642063 584 ntBASIC18.66■□□□□ 0.58
TPM3P06753 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM3P06753 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM3P06753 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.65■□□□□ 0.58
TPM3P06753 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM3P06753 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM3P06753 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM3P06753 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms