Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC190387.1-201ENST00000551683 408 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 AC105021.1-202ENST00000570572 669 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 LINC02560-201ENST00000596379 459 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DOAP06340 RN7SL828P-201ENST00000607615 303 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 AC008761.3-201ENST00000624803 892 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOAP06340 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOAP06340 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DOAP06340 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOAP06340 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DOAP06340 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DOAP06340 AC106820.2-201ENST00000563775 3264 ntBASIC19.45■□□□□ 0.7
HLA-DOAP06340 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOAP06340 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DOAP06340 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DOAP06340 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 PCDHB18P-201ENST00000524813 2368 ntBASIC19.44■□□□□ 0.7
HLA-DOAP06340 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 MIR661-201ENST00000384842 89 ntBASIC19.44■□□□□ 0.7
HLA-DOAP06340 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 AC024267.1-201ENST00000582320 895 ntBASIC19.44■□□□□ 0.7
HLA-DOAP06340 AL589739.1-201ENST00000607720 493 ntBASIC19.44■□□□□ 0.7
HLA-DOAP06340 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DOAP06340 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DOAP06340 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 GGT4P-201ENST00000623672 1708 ntBASIC19.43■□□□□ 0.7
HLA-DOAP06340 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 TSSK5P-201ENST00000423978 907 ntBASIC19.43■□□□□ 0.7
HLA-DOAP06340 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.43■□□□□ 0.7
HLA-DOAP06340 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DOAP06340 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DOAP06340 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AL589702.1-201ENST00000641229 1509 ntBASIC19.42■□□□□ 0.7
HLA-DOAP06340 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AP001094.4-201ENST00000579008 2176 ntBASIC19.42■□□□□ 0.7
HLA-DOAP06340 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DOAP06340 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 AC022144.1-201ENST00000602255 1580 ntBASIC19.42■□□□□ 0.7
HLA-DOAP06340 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DOAP06340 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms