Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
APOC1P02654 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 AC006277.1-201ENST00000624348 1610 ntBASIC14.75□□□□□ -0.05
APOC1P02654 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC1P02654 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC1P02654 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC1P02654 LAGE3P1-201ENST00000425356 484 ntBASIC14.75□□□□□ -0.05
APOC1P02654 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.75□□□□□ -0.05
APOC1P02654 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC1P02654 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
APOC1P02654 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC1P02654 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC1P02654 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.74□□□□□ -0.05
APOC1P02654 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 HLA-A-202ENST00000376806 1854 ntBASIC14.74□□□□□ -0.05
APOC1P02654 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 PAWRP1-201ENST00000451083 565 ntBASIC14.74□□□□□ -0.05
APOC1P02654 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 GGTLC5P-201ENST00000617623 998 ntBASIC14.74□□□□□ -0.05
APOC1P02654 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.74□□□□□ -0.05
APOC1P02654 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC1P02654 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC1P02654 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC1P02654 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOC1P02654 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.73□□□□□ -0.05
APOC1P02654 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC1P02654 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms