Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
PDGFBP01127 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.46■□□□□ 0.23
PDGFBP01127 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFBP01127 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
PDGFBP01127 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 AC006033.1-201ENST00000440505 426 ntBASIC16.46■□□□□ 0.23
PDGFBP01127 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFBP01127 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 AP000812.2-201ENST00000538934 718 ntBASIC16.46■□□□□ 0.23
PDGFBP01127 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFBP01127 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.46■□□□□ 0.23
PDGFBP01127 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 AC133539.2-201ENST00000604757 467 ntBASIC16.46■□□□□ 0.23
PDGFBP01127 AC106872.11-201ENST00000605838 421 ntBASIC16.46■□□□□ 0.23
PDGFBP01127 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PDGFBP01127 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 AC133963.1-201ENST00000504166 1679 ntBASIC16.46■□□□□ 0.23
PDGFBP01127 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PDGFBP01127 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFBP01127 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
PDGFBP01127 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 AL589702.1-201ENST00000641229 1509 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 YBX1P6-201ENST00000442962 1002 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.45■□□□□ 0.22
PDGFBP01127 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 AP001889.1-201ENST00000525414 633 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 RN7SL560P-201ENST00000577943 264 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 AC016629.1-201ENST00000596579 586 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFBP01127 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.45■□□□□ 0.22
PDGFBP01127 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFBP01127 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDGFBP01127 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFBP01127 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDGFBP01127 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms