Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.71■□□□□ 0.27
VAPBO95292 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VAPBO95292 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VAPBO95292 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 MRPL3P1-201ENST00000400109 1033 ntBASIC16.71■□□□□ 0.27
VAPBO95292 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.71■□□□□ 0.27
VAPBO95292 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.71■□□□□ 0.27
VAPBO95292 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.71■□□□□ 0.27
VAPBO95292 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.71■□□□□ 0.27
VAPBO95292 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.71■□□□□ 0.27
VAPBO95292 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
VAPBO95292 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VAPBO95292 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VAPBO95292 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.71■□□□□ 0.26
VAPBO95292 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VAPBO95292 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 GPAA1P2-202ENST00000606848 1787 ntBASIC16.7■□□□□ 0.26
VAPBO95292 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VAPBO95292 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VAPBO95292 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 AC108751.1-201ENST00000490852 363 ntBASIC16.7■□□□□ 0.26
VAPBO95292 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.7■□□□□ 0.26
VAPBO95292 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 AC010654.1-201ENST00000615722 808 ntBASIC16.7■□□□□ 0.26
VAPBO95292 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 AC116407.3-201ENST00000623905 1129 ntBASIC16.7■□□□□ 0.26
VAPBO95292 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.7■□□□□ 0.26
VAPBO95292 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VAPBO95292 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.7■□□□□ 0.26
VAPBO95292 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.69■□□□□ 0.26
VAPBO95292 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.69■□□□□ 0.26
VAPBO95292 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 AC098831.1-202ENST00000438821 336 ntBASIC16.69■□□□□ 0.26
VAPBO95292 FAM185BP-201ENST00000443595 716 ntBASIC16.69■□□□□ 0.26
VAPBO95292 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.69■□□□□ 0.26
VAPBO95292 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 MIR4751-201ENST00000578027 74 ntBASIC16.69■□□□□ 0.26
VAPBO95292 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms