Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRCH4O75427 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH4O75427 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH4O75427 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.25■□□□□ 0.35
LRCH4O75427 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.25■□□□□ 0.35
LRCH4O75427 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.25■□□□□ 0.35
LRCH4O75427 AC120114.3-201ENST00000611923 658 ntBASIC17.25■□□□□ 0.35
LRCH4O75427 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH4O75427 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH4O75427 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH4O75427 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH4O75427 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
LRCH4O75427 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRCH4O75427 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 AC140658.5-201ENST00000438532 169 ntBASIC17.24■□□□□ 0.35
LRCH4O75427 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.24■□□□□ 0.35
LRCH4O75427 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.24■□□□□ 0.35
LRCH4O75427 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRCH4O75427 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.24■□□□□ 0.35
LRCH4O75427 AC106730.1-201ENST00000566722 1090 ntBASIC17.24■□□□□ 0.35
LRCH4O75427 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.24■□□□□ 0.35
LRCH4O75427 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRCH4O75427 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH4O75427 ZNF259P1-201ENST00000407656 1365 ntBASIC17.24■□□□□ 0.35
LRCH4O75427 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRCH4O75427 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH4O75427 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRCH4O75427 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRCH4O75427 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.23■□□□□ 0.35
LRCH4O75427 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRCH4O75427 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.23■□□□□ 0.35
LRCH4O75427 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
LRCH4O75427 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.23■□□□□ 0.35
LRCH4O75427 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.23■□□□□ 0.35
LRCH4O75427 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.23■□□□□ 0.35
LRCH4O75427 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms