Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.89□□□□□ -0.03
ZIC3O60481 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC3O60481 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ZIC3O60481 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.89□□□□□ -0.03
ZIC3O60481 METTL21AP1-201ENST00000438852 635 ntBASIC14.89□□□□□ -0.03
ZIC3O60481 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC3O60481 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.89□□□□□ -0.03
ZIC3O60481 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.89□□□□□ -0.03
ZIC3O60481 LINC00628-201ENST00000628516 1289 ntBASIC14.89□□□□□ -0.03
ZIC3O60481 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.89□□□□□ -0.03
ZIC3O60481 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZIC3O60481 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC3O60481 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZIC3O60481 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ZIC3O60481 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.89□□□□□ -0.03
ZIC3O60481 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZIC3O60481 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.89□□□□□ -0.03
ZIC3O60481 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
ZIC3O60481 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.88□□□□□ -0.03
ZIC3O60481 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AC009053.2-201ENST00000563701 2365 ntBASIC14.88□□□□□ -0.03
ZIC3O60481 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.88□□□□□ -0.03
ZIC3O60481 RBPMS2P1-201ENST00000437762 623 ntBASIC14.88□□□□□ -0.03
ZIC3O60481 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.88□□□□□ -0.03
ZIC3O60481 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ZIC3O60481 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.88□□□□□ -0.03
ZIC3O60481 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZIC3O60481 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 AC005622.1-201ENST00000636801 1703 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 PMS2P2-201ENST00000425039 1128 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 AC098859.1-201ENST00000502915 1238 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 ALG1L8P-201ENST00000533887 760 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 AC004449.1-201ENST00000564240 433 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.87□□□□□ -0.03
ZIC3O60481 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 SPTSSB-204ENST00000617024 1292 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms