Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 AP000842.3-202ENST00000569238 1080 ntBASIC16.46■□□□□ 0.23
PCDHGA12O60330 AC091167.2-201ENST00000579581 588 ntBASIC16.46■□□□□ 0.23
PCDHGA12O60330 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA12O60330 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.46■□□□□ 0.23
PCDHGA12O60330 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA12O60330 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDHGA12O60330 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA12O60330 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDHGA12O60330 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 RNU1-129P-201ENST00000384064 167 ntBASIC16.45■□□□□ 0.22
PCDHGA12O60330 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.45■□□□□ 0.22
PCDHGA12O60330 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 U1.21-201ENST00000580816 167 ntBASIC16.45■□□□□ 0.22
PCDHGA12O60330 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
PCDHGA12O60330 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA12O60330 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA12O60330 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 AC027307.2-201ENST00000591252 911 ntBASIC16.44■□□□□ 0.22
PCDHGA12O60330 AL031055.1-201ENST00000606362 631 ntBASIC16.44■□□□□ 0.22
PCDHGA12O60330 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms