Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
HOXA2O43364 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA2O43364 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 SPDYE17-201ENST00000412399 783 ntBASIC17.62■□□□□ 0.41
HOXA2O43364 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 API5-211ENST00000534695 560 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA2O43364 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA2O43364 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HOXA2O43364 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA2O43364 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA2O43364 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA2O43364 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA2O43364 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HOXA2O43364 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.61■□□□□ 0.41
HOXA2O43364 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 AL031731.1-201ENST00000642131 2094 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 OR8S1-201ENST00000310194 1080 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 AL645728.1-201ENST00000366221 2101 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA2O43364 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA2O43364 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA2O43364 AL512361.1-201ENST00000554200 418 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 AC104794.3-201ENST00000566840 1248 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA2O43364 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA2O43364 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 AL033527.5-202ENST00000641632 1098 ntBASIC17.61■□□□□ 0.41
HOXA2O43364 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HOXA2O43364 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HOXA2O43364 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA2O43364 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA2O43364 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.6■□□□□ 0.41
HOXA2O43364 AL139010.1-201ENST00000454878 894 ntBASIC17.6■□□□□ 0.41
HOXA2O43364 DOC2GP-202ENST00000514950 1163 ntBASIC17.6■□□□□ 0.41
HOXA2O43364 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.6■□□□□ 0.41
HOXA2O43364 MIR6069-201ENST00000620069 79 ntBASIC17.6■□□□□ 0.41
HOXA2O43364 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.6■□□□□ 0.41
HOXA2O43364 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA2O43364 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HOXA2O43364 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA2O43364 OR6D1P-203ENST00000641209 4860 ntBASIC17.6■□□□□ 0.41
HOXA2O43364 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms