Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM38O00635 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM38O00635 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM38O00635 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 SLC25A6P2-201ENST00000497974 877 ntBASIC16.74■□□□□ 0.27
TRIM38O00635 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM38O00635 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM38O00635 AC092364.2-202ENST00000597012 1073 ntBASIC16.74■□□□□ 0.27
TRIM38O00635 AC022145.2-201ENST00000598203 171 ntBASIC16.74■□□□□ 0.27
TRIM38O00635 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM38O00635 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM38O00635 PCDHB17P-201ENST00000539533 2393 ntBASIC16.74■□□□□ 0.27
TRIM38O00635 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM38O00635 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM38O00635 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM38O00635 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.73■□□□□ 0.27
TRIM38O00635 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 AC006449.5-201ENST00000610658 2098 ntBASIC16.73■□□□□ 0.27
TRIM38O00635 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM38O00635 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM38O00635 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM38O00635 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM38O00635 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM38O00635 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRIM38O00635 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 FER1L4-210ENST00000615531 5998 ntBASIC16.73■□□□□ 0.27
TRIM38O00635 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM38O00635 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM38O00635 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.72■□□□□ 0.27
TRIM38O00635 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM38O00635 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM38O00635 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM38O00635 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
TRIM38O00635 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM38O00635 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
TRIM38O00635 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM38O00635 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM38O00635 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM38O00635 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms