Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 AL603832.2-201ENST00000566195 2125 ntBASIC17.26■□□□□ 0.35
SRRM3A6NNA2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ALOX12P2-203ENST00000570921 1945 ntBASIC17.25■□□□□ 0.35
SRRM3A6NNA2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AL391256.1-201ENST00000443260 1855 ntBASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CNN2P11-201ENST00000429351 262 ntBASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 MIR4469-201ENST00000583919 79 ntBASIC17.25■□□□□ 0.35
SRRM3A6NNA2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRRM3A6NNA2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AC138761.1-201ENST00000584393 385 ntBASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRRM3A6NNA2 EGFEM1P-202ENST00000431685 1563 ntBASIC17.23■□□□□ 0.35
SRRM3A6NNA2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.23■□□□□ 0.35
SRRM3A6NNA2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SRRM3A6NNA2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms