Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 NTF6B-201ENST00000591913 560 ntBASIC18.07■□□□□ 0.48
CCDC66A2RUB6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 GPR89P-201ENST00000407924 1495 ntBASIC18.07■□□□□ 0.48
CCDC66A2RUB6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 FRMD8P1-201ENST00000440433 1524 ntBASIC18.06■□□□□ 0.48
CCDC66A2RUB6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC66A2RUB6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 KLF4P1-201ENST00000412782 1185 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 BX276092.5-203ENST00000456199 560 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 AL445228.2-201ENST00000605589 952 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.05■□□□□ 0.48
CCDC66A2RUB6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC66A2RUB6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC66A2RUB6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms