Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 AL671710.1-201ENST00000610245 2349 ntBASIC15.76■□□□□ 0.11
AP4S1Q9Y587 PRORSD1P-201ENST00000295112 541 ntBASIC15.76■□□□□ 0.11
AP4S1Q9Y587 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP4S1Q9Y587 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 MIR935-201ENST00000401179 91 ntBASIC15.75■□□□□ 0.11
AP4S1Q9Y587 KLF4P1-201ENST00000412782 1185 ntBASIC15.75■□□□□ 0.11
AP4S1Q9Y587 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 AL355075.4-201ENST00000554988 638 ntBASIC15.75■□□□□ 0.11
AP4S1Q9Y587 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 AL390719.2-201ENST00000606993 987 ntBASIC15.75■□□□□ 0.11
AP4S1Q9Y587 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP4S1Q9Y587 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SPDYE15P-201ENST00000424157 909 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 GCSHP5-201ENST00000443090 522 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AC098590.1-201ENST00000468126 897 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AC092597.1-201ENST00000487352 616 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 AL138831.2-201ENST00000606564 490 ntBASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.74■□□□□ 0.11
AP4S1Q9Y587 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms