Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 CDC14C-201ENST00000428251 1719 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 LINC02447-202ENST00000501888 2146 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 TERF1P1-201ENST00000311003 1181 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 AC005521.1-201ENST00000393351 872 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ATP5G1P1-201ENST00000448724 379 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ECEL1P2-202ENST00000465689 757 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 AL512604.3-201ENST00000569583 964 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 MIR4674-201ENST00000582457 87 ntBASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRCH1Q9Y2L9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 AL391807.1-203ENST00000604392 2365 ntBASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 FAM87A-204ENST00000613235 858 ntBASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRCH1Q9Y2L9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 AC016027.1-202ENST00000607927 1699 ntBASIC15.83■□□□□ 0.13
LRCH1Q9Y2L9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms