Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPO2Q9UMS6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 AL592424.1-201ENST00000563624 1536 ntBASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 RNF216P1-203ENST00000404404 2427 ntBASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPO2Q9UMS6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPO2Q9UMS6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms