Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRFN1Q9P244 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRFN1Q9P244 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRFN1Q9P244 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRFN1Q9P244 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LRFN1Q9P244 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.24■□□□□ 0.03
LRFN1Q9P244 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRFN1Q9P244 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LRFN1Q9P244 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRFN1Q9P244 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 AL138918.1-201ENST00000568306 659 ntBASIC15.23■□□□□ 0.03
LRFN1Q9P244 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.23■□□□□ 0.03
LRFN1Q9P244 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRFN1Q9P244 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 SPDYE14P-201ENST00000442619 822 ntBASIC15.22■□□□□ 0.03
LRFN1Q9P244 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 AC105233.2-201ENST00000523697 349 ntBASIC15.22■□□□□ 0.03
LRFN1Q9P244 AF228730.5-201ENST00000530288 346 ntBASIC15.22■□□□□ 0.03
LRFN1Q9P244 ALG1L8P-201ENST00000533887 760 ntBASIC15.22■□□□□ 0.03
LRFN1Q9P244 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRFN1Q9P244 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRFN1Q9P244 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRFN1Q9P244 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRFN1Q9P244 AL391256.1-201ENST00000443260 1855 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms