Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.77□□□□□ -0.21
CALYQ9NYX4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CALYQ9NYX4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CALYQ9NYX4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 GPAA1P2-202ENST00000606848 1787 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 IGLL3P-201ENST00000412472 434 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 HCG4B-203ENST00000450128 991 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 AL645728.2-201ENST00000641974 660 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 AC005052.1-201ENST00000625181 2492 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 AC092364.2-201ENST00000596710 2692 ntBASIC13.76□□□□□ -0.21
CALYQ9NYX4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
CALYQ9NYX4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CALYQ9NYX4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AL031432.2-201ENST00000566714 459 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 AL928711.1-201ENST00000570165 459 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AL121894.2-201ENST00000602977 491 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 CYP2T1P-202ENST00000641596 2535 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 PCGF3-213ENST00000620529 1899 ntBASIC13.75□□□□□ -0.21
CALYQ9NYX4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CALYQ9NYX4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.75□□□□□ -0.21
CALYQ9NYX4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms