Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SAPCD2P3-201ENST00000455031 850 ntBASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AC092183.1-201ENST00000469884 875 ntBASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AL139011.1-202ENST00000642063 584 ntBASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCM2LQ9NUG4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 AC125634.1-201ENST00000438758 1403 ntBASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.87■□□□□ 0.13
CCM2LQ9NUG4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 KRT18P58-201ENST00000527480 1120 ntBASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AL390719.2-201ENST00000606993 987 ntBASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCM2LQ9NUG4 AP005117.1-202ENST00000581724 1908 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms