Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AP006294.1-201ENST00000415407 339 ntBASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AC132938.2-201ENST00000579188 680 ntBASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 MIR6805-201ENST00000615055 62 ntBASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AL591163.1-201ENST00000641757 987 ntBASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 AC006538.1-201ENST00000567905 1585 ntBASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 RN7SL752P-201ENST00000463779 287 ntBASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 AC104794.3-201ENST00000566840 1248 ntBASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 AL035456.1-201ENST00000456064 1369 ntBASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM7Q9NR12 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 AC112492.5-201ENST00000421897 457 ntBASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 GNAQP1-201ENST00000444815 1067 ntBASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms