Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
KIAA1549Q9HCM3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 MIR346-201ENST00000362234 95 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 SPDYE7P-202ENST00000420373 878 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 TSSK5P-201ENST00000423978 907 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 COX20P2-201ENST00000452636 358 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AC061975.2-201ENST00000581722 295 ntBASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KIAA1549Q9HCM3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC100757.3-201ENST00000622361 1406 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC099398.1-201ENST00000567919 2776 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC236430.1-201ENST00000402231 743 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AL138828.2-201ENST00000615812 383 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AL590560.3-201ENST00000623350 461 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KIAA1549Q9HCM3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.67□□□□□ -0.06
KIAA1549Q9HCM3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms