Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRTM1Q9HBL6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 AC007950.2-201ENST00000615045 2347 ntBASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 KRT18P27-201ENST00000427733 1299 ntBASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 OR7E14P-202ENST00000530490 1290 ntBASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 AC087641.1-201ENST00000557561 1021 ntBASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.01■□□□□ 0.15
LRTM1Q9HBL6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 GPAA1P2-202ENST00000606848 1787 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 NFIC-211ENST00000641145 8399 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AC129492.6-201ENST00000611383 1305 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 PCGF3-213ENST00000620529 1899 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 AL450487.1-201ENST00000426799 995 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 RPS2P1-201ENST00000434010 821 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AC136632.2-201ENST00000512891 861 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AC005412.3-201ENST00000580309 715 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 AL121894.2-201ENST00000602977 491 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 IFNL4P1-201ENST00000607083 540 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AL691432.3-201ENST00000621860 400 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 AC012313.10-201ENST00000623509 926 ntBASIC16■□□□□ 0.15
LRTM1Q9HBL6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16■□□□□ 0.15
LRTM1Q9HBL6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRTM1Q9HBL6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms